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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12549278 chr8:16242981 A/G LEPROTL1 chr8:29952914-30034724:+ 0.58 6.58 1.57E-10 Box Plot
BLCA rs12549278 chr8:16242981 A/G PBK chr8:27667137-27695612:- 0.38 6.05 3.39E-9 Box Plot
BLCA rs12549278 chr8:16242981 A/G PCM1 chr8:17780349-17887453:+ 0.49 6.24 1.14E-9 Box Plot
BLCA rs12549278 chr8:16242981 A/G XPO7 chr8:21777182-21864096:+ 0.63 7.54 3.48E-13 Box Plot
BLCA rs12561772 chr1:35755725 C/T KRTAP13-1 chr21:31768392-31769140:+ 0.21 6.92 1.85E-11 Box Plot
BLCA rs12565048 chr1:35731697 G/A KRTAP13-1 chr21:31768392-31769140:+ 0.21 6.78 4.67E-11 Box Plot
BLCA rs12566263 chr1:35806527 G/A KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.39 4.93E-10 Box Plot
BLCA rs12566321 chr1:188701601 A/T GPR149 chr3:154055461-154147504:- -0.42 -6.16 1.8E-9 Box Plot
BLCA rs12567617 chr1:35806485 T/C KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.38 5.01E-10 Box Plot
BLCA rs12571011 chr10:67843797 A/G KRT72 chr12:52979373-52995322:- -0.31 -6.02 4.12E-9 Box Plot
BLCA rs12575779 chr11:115497034 C/T BUD13 chr11:116618886-116643704:- -0.66 -6.06 3.25E-9 Box Plot
BLCA rs12575779 chr11:115497034 C/T C11orf57 chr11:111944810-111955874:+ -0.67 -6.03 3.78E-9 Box Plot
BLCA rs12575779 chr11:115497034 C/T DLAT chr11:111895538-111935114:+ -0.66 -7.14 4.81E-12 Box Plot
BLCA rs12575779 chr11:115497034 C/T ZNF259 chr11:116648436-116658766:- -0.68 -6.35 6.15E-10 Box Plot
BLCA rs12575779 chr11:115497034 C/T ZW10 chr11:113603909-113644533:- -0.65 -7.37 1.05E-12 Box Plot